Back to Getting started in cryo-EM
Caltech

Getting started in cryo-EM

This class covers the fundamental principles underlying cryo-electron microscopy (cryo-EM) starting with the basic anatomy of electron microscopes, an introduction to Fourier transforms, and the principles of image formation. Building upon that foundation, the class then covers the sample preparation issues, data collection strategies, and basic image processing workflows for all 3 basic modalities of modern cryo-EM: tomography, single particle analysis, and 2-D crystallography. Philosophy: The course emphasizes concepts rather than mathematical details, taught through numerous drawings and example images. It is meant for anyone interested in the burgeoning fields of cryo-EM and 3-D EM, including cell biologists or molecular biologists without extensive training in mathematics or imaging physics and practicing electron microscopists who want to broaden their understanding of the field. The class is perfect as a primer for anyone who is about to be trained as a cryo-electron microscopist, or for anyone who needs an introduction to the field to be able to understand the literature or the talks and conversations they will hear at cryo-EM meetings. Pre-requisites: The recommended prerequisites are college-freshman-level math, physics, and biochemistry. Pace: There are 14.5 hours of lecture videos total separated into 40 individual “modules” lasting on average 20 minutes each. Each module has at the end a list of “concept check” questions you can use to test your knowledge of what was presented. As the modules are grouped into seven major subjects, one reasonable plan would be to go through one major subject each day. That would mean watching a couple hours of lecture and spending another hour or so thinking through the concept check questions each day for a week. Another reasonable plan would be to go through one module each day for a little over a month, or even three modules a week (Monday, Wednesday, and Friday) for a 3-month term. It is likely that as you then move on to actually begin using a cryo-EM or otherwise engage in the field, you will want to repeat certain modules.

Status: Laboratory Techniques
Status: Medical Imaging
Course21 hours

Featured reviews

IN

5.0Reviewed Jun 8, 2016

Really good introduction to cryo-EM and EM in general!

NM

5.0Reviewed Jun 14, 2020

It is great a course for all the information one need to have on Electron Microscopy from the basic knowledge to Cryo-Electron.

DP

5.0Reviewed Dec 14, 2019

Amazing course. The explanations are detailed, but very accessible. The course is very good at giving an intuition for the subject

LR

5.0Reviewed Feb 18, 2018

Great course. I thought it was presented in a very informative way and i learned a lot about cryo-EM. In fact, it made me want to learn more about it. Thank you.

MG

4.0Reviewed Jan 1, 2016

Great introduction to Cryo-EM for biologists that covers all the basics in a clear and concise manner.

DB

5.0Reviewed Nov 13, 2015

Very nice description of electronic microscopy techniques

JF

5.0Reviewed May 17, 2017

Great course, very informal - really improved my knowledge in the field of EM

SS

5.0Reviewed Jan 25, 2017

I have worked a bit in cryo-em before and I find this course absolutely amazing! Very detailed and easy to understand.

HA

4.0Reviewed Jan 31, 2016

Great information, great teacher, greater visual presentation. Disclaimer: I only took the first week.

NL

5.0Reviewed Mar 21, 2019

Great course. Pity is that you don't give the certificate. Anyway, I'd like to thank to prof. Jensen for it.

YR

5.0Reviewed Aug 27, 2015

Very clear, very easy to understand, a lot of useful information. Excellent course.

SA

5.0Reviewed Nov 25, 2015

best course for lab workers ,physics is deal in a great detail

All reviews

Showing: 20 of 53

Andrew L. Plecki
4.0
Reviewed Aug 19, 2015
pavan kumar
5.0
Reviewed Aug 14, 2015
Gerardo Martinez Herrera
5.0
Reviewed Mar 27, 2018
Aleix Lafita Masip
5.0
Reviewed Jul 20, 2016
Diego Fernández Prado
5.0
Reviewed Dec 15, 2019
Nitisha Mehrotra
5.0
Reviewed Jun 15, 2020
Nada Labajova
5.0
Reviewed Mar 22, 2019
Saswat K. Mohanty
5.0
Reviewed Jul 17, 2021
Nikos Nikolopoulos
5.0
Reviewed Oct 30, 2017
Gary Upshaw
5.0
Reviewed Jun 19, 2016
Chen Sun
5.0
Reviewed Aug 16, 2015
William Navarre
5.0
Reviewed Aug 31, 2018
Philip B. Papier, Jr.
5.0
Reviewed Aug 27, 2015
Robert Fagiewicz
5.0
Reviewed Apr 4, 2017
Matteo Giono
5.0
Reviewed Apr 14, 2022
Shijian Zhang
5.0
Reviewed Nov 1, 2015
Lance Richardson
5.0
Reviewed Feb 19, 2018
Serhiy Surkov
5.0
Reviewed Jan 26, 2017
Bryant Avila
5.0
Reviewed May 16, 2016
Yulia Rozanova
5.0
Reviewed Aug 28, 2015