About this Course
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Flexible deadlines

Reset deadlines in accordance to your schedule.

Intermediate Level

Approx. 14 hours to complete

Suggested: 4-5 hours/week...

English

Subtitles: English
Learners taking this Course are
  • Scientists
  • Biologists
  • Researchers
  • Data Scientists
  • Medical Doctors

100% online

Start instantly and learn at your own schedule.

Flexible deadlines

Reset deadlines in accordance to your schedule.

Intermediate Level

Approx. 14 hours to complete

Suggested: 4-5 hours/week...

English

Subtitles: English

Syllabus - What you will learn from this course

Week
1
2 hours to complete

The Library of Integrated Network-based Cellular Signatures (LINCS) Program Overview

8 videos (Total 78 min), 2 readings
8 videos
The Connectivity Map8m
Geometrical View of the Connectivity Map Concept3m
LINCS Data and Signature Generation Centers12m
BD2K-LINCS Data Coordination and Integration Center4m
Induced Pluripotent Stem Cells (iPSCs)4m
Introduction to LINCS L1000 Data22m
L1000 Characteristic Direction Signature Search Engine (L1000CDS2) Demo13m
2 readings
Syllabus10m
Grading and Logistics10m
26 minutes to complete

Metadata and Ontologies

2 videos (Total 26 min)
2 videos
Introduction to Metadata and Ontologies | Part 220m
24 minutes to complete

Serving Data with APIs

2 videos (Total 19 min)
2 videos
Accessing and Serving Data through RESTful APIs | Part 210m
Week
2
19 minutes to complete

Bioinformatics Pipelines

1 video (Total 14 min)
1 hour to complete

The Harmonizome

4 videos (Total 37 min)
4 videos
Processing Datasets | Part 18m
Processing Datasets | Part 29m
Processing Datasets | Part 37m
Week
3
24 minutes to complete

Data Normalization

2 videos (Total 19 min)
2 videos
Data Normalization | Part 213m
1 hour to complete

Data Clustering

3 videos (Total 33 min)
3 videos
Data Clustering | Part 2 | Distance Functions 12m
Data Clustering | Part 3 | Algorithms and Evaluation15m
2 hours to complete

Midterm Exam

1 quiz
1 practice exercise
Midterm Exam1h 30m
Week
4
29 minutes to complete

Enrichment Analysis

3 videos (Total 29 min)
3 videos
Enrichment Analysis | Part 27m
Enrichr Demo9m
1 hour to complete

Machine Learning

3 videos (Total 27 min)
3 videos
Introduction to Machine Learning | Part 2 8m
Introduction to Machine Learning | Part 39m
4.9
4 ReviewsChevron Right

33%

got a tangible career benefit from this course

50%

got a pay increase or promotion

Top reviews from Big Data Science with the BD2K-LINCS Data Coordination and Integration Center

By MSJan 21st 2017

A very practical courses. Very good introduction to Big Data sources and Computational Analysis tool.

By HHSep 19th 2018

excellent oppurtunity for the data science learners

Instructor

Avatar

Avi Ma’ayan, PhD

Director, Mount Sinai Center for Bioinformatics
Professor, Department of Pharmacological Sciences

About Icahn School of Medicine at Mount Sinai

The Icahn School of Medicine at Mount Sinai, in New York City is a leader in medical and scientific training and education, biomedical research and patient care....

Frequently Asked Questions

  • Once you enroll for a Certificate, you’ll have access to all videos, quizzes, and programming assignments (if applicable). Peer review assignments can only be submitted and reviewed once your session has begun. If you choose to explore the course without purchasing, you may not be able to access certain assignments.

  • When you purchase a Certificate you get access to all course materials, including graded assignments. Upon completing the course, your electronic Certificate will be added to your Accomplishments page - from there, you can print your Certificate or add it to your LinkedIn profile. If you only want to read and view the course content, you can audit the course for free.

More questions? Visit the Learner Help Center.