Using Shiny to Plot Differential Gene Expression

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In this Guided Project, you will:

Develop a Shiny app inputs data and build the outputs using the server function.

Build reactive objects to handle your data.

Produce a Shiny app using Shiny and Shiny Dashboard libraries.

ClockAbout 60 minutes required for the project and 60 for the other materials (reading and assignment).
BeginnerBeginner
CloudNo download needed
VideoSplit-screen video
Comment DotsEnglish
LaptopDesktop only

In this project-based course, you will create a Shiny app to plot gene expression data (Real-Time PCR) from a published manuscript. You will build the Shiny app from scratch and handle every component of Shiny. The project covers data processing and collecting feedback from the user to build and finetune the output. In this course, we will be concerned with the optimal use of inputs and outputs. Instead of building a lot of inputs and outputs, we will use a limited number of components and recycle some even seven times for different purposes.

Skills you will develop

Data Visualization (DataViz)gene expressionInteractive web appshiny

Learn step-by-step

In a video that plays in a split-screen with your work area, your instructor will walk you through these steps:

  1. Task 1: Introduction

  2. Task 2: Application types (single and multiple file formats)

  3. Task 3: UI - Inputs

  4. Task 4: UI - Outputs

  5. Task 5: Reactivity - Server-Side Function

  6. Task 6: Reactivity - Part Two

  7. Task 7: Shiny Themes

  8. Task 8: Shiny Dashboard

  9. Task 9: Create Gadget

How Guided Projects work

Your workspace is a cloud desktop right in your browser, no download required

In a split-screen video, your instructor guides you step-by-step

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Frequently asked questions

Frequently Asked Questions

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