About this Course
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Start instantly and learn at your own schedule.

Flexible deadlines

Reset deadlines in accordance to your schedule.

Beginner Level

Approx. 11 hours to complete

Suggested: This course will run over 5 weeks, 2-3 hours a week...

English

Subtitles: English

Skills you will gain

NucleotideAntimicrobialGenomeMicrobiology

100% online

Start instantly and learn at your own schedule.

Flexible deadlines

Reset deadlines in accordance to your schedule.

Beginner Level

Approx. 11 hours to complete

Suggested: This course will run over 5 weeks, 2-3 hours a week...

English

Subtitles: English

Syllabus - What you will learn from this course

Week
1
1 hour to complete

Module 1

3 videos (Total 32 min), 1 quiz
3 videos
General Principles of typing of bacteria12m
Surveillance of Antimicrobial Resistance using whole genome sequencing12m
1 practice exercise
Module 120m
Week
2
1 hour to complete

Module 2

3 videos (Total 37 min), 1 quiz
3 videos
Introduction to Next-Generation sequencing (NGS)19m
De novo assembly- from raw reads to contigs: assembler tool description and application5m
1 practice exercise
Module 230m
Week
3
1 hour to complete

Module 3

3 videos (Total 30 min), 1 quiz
3 videos
MLST Typing: MLST tool description and applications8m
Resistance gene detection: Resfinder tool description and applications12m
1 practice exercise
Module 320m
Week
4
1 hour to complete

Module 4

3 videos (Total 24 min), 1 quiz
3 videos
E. coli serotype identification: serotype finder tool description and applications6m
Plasmid replicon identification and plasmid typing12m
1 practice exercise
Module 420m
4.6
86 ReviewsChevron Right

31%

started a new career after completing these courses

25%

got a tangible career benefit from this course

11%

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Top reviews from Whole genome sequencing of bacterial genomes - tools and applications

By MBJun 10th 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

By XLJun 30th 2019

The course is using cutting-edge genome sequencing technology and the authentic software to showcasing the applications and tools of genome sequencing. It is a great chance to learn it.

Instructors

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Lina Cavaco

Ext Associate Professor
Copenhagen University- ICMM /Statens Serum Institut - Department for Bacteria, Parasites and Fungi
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Pimlapas Leekitcharoenphon

PostDoc
Research Group for Genomic Epidemiology, DTU Food

About Technical University of Denmark (DTU)

DTU focuses on research in technical and natural sciences that contributes to the development of society. As an industrially orientated university, our goal is to supply high-level international research based on combining theory with constructing models and empirical methods....

Frequently Asked Questions

  • Once you enroll for a Certificate, you’ll have access to all videos, quizzes, and programming assignments (if applicable). Peer review assignments can only be submitted and reviewed once your session has begun. If you choose to explore the course without purchasing, you may not be able to access certain assignments.

  • When you purchase a Certificate you get access to all course materials, including graded assignments. Upon completing the course, your electronic Certificate will be added to your Accomplishments page - from there, you can print your Certificate or add it to your LinkedIn profile. If you only want to read and view the course content, you can audit the course for free.

More questions? Visit the Learner Help Center.